Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX470988: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-321170' containing sample 'M1441'
2 ILLUMINA (Illumina HiSeq 2000) runs: 3.3M spots, 673.8M bases, 309.1Mb downloads

UUID: 68c46223-c548-4618-86c1-7b370f4fe1d6

Design: Illumina sequencing of Mycobacterium tuberculosis M1441 via random selection

Submitted by: Broad Institute (BI)

Study: TB-ARC - India

PRJNA235698 • SRP037906 • All experiments • All runs

Sample:

SAMN02599033 • SRS557813 • All experiments • All runs

Organism: Mycobacterium tuberculosis M1441

Library:

Name: Pond-321170

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 12 attributes...) (hide...)

analysis_type: AssemblyWithReference

gssr_id: 478518.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5ED7U

material_type: DNA:DNA Somatic

product_order: PDO-2811

product_part_number: P-MCV-0004

project: G57768

research_project: RP-114

root_sample_id: SM-4P56Q

sample_id: SM-5ED7U

work_request: 39947

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-09 14:32:02.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 3.3M spots, 673.8M bases, 309.1Mb

Run	# of Spots	# of Bases	Size	Published
SRR1169497	1,664,637	336.3M	154Mb	2014-02-14
SRR1172246	1,671,120	337.6M	155.1Mb	2014-02-19

ID:: 651237

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